3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03511

Details:

PFam ID : PF03511

PFam Domain Description : Fanconi anaemia group A protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 8

Average sequence length: 56

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03511	B2Y6C9_9CALI_820_942	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03511	E1B6X8_BOVIN_1244_1306	100

Sequence based PCA Plot of the family - PF03511 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay