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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06346
Details:

PFam ID : PF06346

PFam Domain Description : Formin Homology Region 1

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 24

Average sequence length: 138.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF06346B3SCG7_TRIAD_70_207No suitable BRS could be identified
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF06346E1BW30_CHICK_532_63882.6
Sequence based PCA Plot of the family - PF06346 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay