3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08150

Details:

PFam ID : PF08150

PFam Domain Description : FerI (NUC094) domain

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 66

Average sequence length: 74.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08150	D2XNI6_SACKO_1_38	27.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08150	F2UPX9_9EUKA_329_407	100

Sequence based PCA Plot of the family - PF08150 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=4 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay