3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00757

Details:

PFam ID : PF00757

PFam Domain Description : Furin-like cysteine rich region

Number of Sequence in 50% Dataset : 73

Number of Sequence in Full Dataset : 208

Average sequence length: 143.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00757	A9NJ76_FELCA_116_191	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00757	E9C1A2_9EUKA_875_973	100

Sequence based PCA Plot of the family - PF00757 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=3 Length=17
Motif2 Start=56 Length=11
Motif3 Start=31 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay