3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02432

Details:

PFam ID : PF02432

PFam Domain Description : FimH, mannose binding

Number of Sequence in 50% Dataset : 29

Number of Sequence in Full Dataset : 69

Average sequence length: 215.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02432	B6ICN8_ECOSE_27_279	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02432	E9Z1T9_ECOLX_30_266	100

Sequence based PCA Plot of the family - PF02432 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay