3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08537 Details: PFam ID : PF08537 PFam Domain Description : Fungal Nap binding protein NBP1 Number of Sequence in 50% Dataset : 11 Number of Sequence in Full Dataset : 12 Average sequence length: 241.9 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08537A7TH88_VANPO_1_37890 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08537C8ZJK3_YEAS8_1_77100 Sequence based PCA Plot of the family - PF08537 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=28 Length=8Motif2 Start=19 Length=8Motif3 Start=10 Length=8Motif4 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF08537
PFam Domain Description : Fungal Nap binding protein NBP1
Number of Sequence in 50% Dataset : 11
Number of Sequence in Full Dataset : 12
Average sequence length: 241.9
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER