3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09766

Details:

PFam ID : PF09766

PFam Domain Description : Fertility inhibition protein N terminal

Number of Sequence in 50% Dataset : 67

Number of Sequence in Full Dataset : 129

Average sequence length: 252.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09766	E9BXG2_9EUKA_1_244	71.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09766	E7A2E9_9BASI_53_225	99.2

Sequence based PCA Plot of the family - PF09766 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=324 Length=8
Motif3 Start=184 Length=8
Motif4 Start=370 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay