3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08698 Details: PFam ID : PF08698 PFam Domain Description : Fcf2 pre-rRNA processing Number of Sequence in 50% Dataset : 28 Number of Sequence in Full Dataset : 152 Average sequence length: 97.6 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08698D7KPY9_ARALL_2_3744.4 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08698F0VAJ4_NEOCA_316_438100 Sequence based PCA Plot of the family - PF08698 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=29 Length=18Motif2 Start=20 Length=8Motif3 Start=11 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF08698
PFam Domain Description : Fcf2 pre-rRNA processing
Number of Sequence in 50% Dataset : 28
Number of Sequence in Full Dataset : 152
Average sequence length: 97.6
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER