3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05137

Details:

PFam ID : PF05137

PFam Domain Description : Fimbrial assembly protein (PilN)

Number of Sequence in 50% Dataset : 265

Number of Sequence in Full Dataset : 515

Average sequence length: 81.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05137	B6Y7K6_9RICK_73_296	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05137	Q306N5_MYXXD_101_221	100

Sequence based PCA Plot of the family - PF05137 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay