3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07335

Details:

PFam ID : PF07335

PFam Domain Description : Fungal chitosanase of glycosyl hydrolase group 75

Number of Sequence in 50% Dataset : 24

Number of Sequence in Full Dataset : 92

Average sequence length: 158.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07335	B2UMZ7_AKKM8_255_455	13.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07335	D6XC71_9ACTO_142_209	100

Sequence based PCA Plot of the family - PF07335 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=169 Length=8
Motif3 Start=91 Length=8
Motif4 Start=129 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay