3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00734

Details:

PFam ID : PF00734

PFam Domain Description : Fungal cellulose binding domain

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 627

Average sequence length: 28.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00734	A6SMP9_BOTFB_792_806	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00734	C9WJD3_METAN_351_369	95.2

Sequence based PCA Plot of the family - PF00734 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=4 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay