3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07729

Details:

PFam ID : PF07729

PFam Domain Description : FCD domain

Number of Sequence in 50% Dataset : 2502

Number of Sequence in Full Dataset : 6576

Average sequence length: 124.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07729	C4U3V2_YERAL_1_59	96.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07729	D7YC33_ECOLX_84_153	100

Sequence based PCA Plot of the family - PF07729 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay