3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03358

Details:

PFam ID : PF03358

PFam Domain Description : Flavin-binding monooxygenase-like

Number of Sequence in 50% Dataset : 462

Number of Sequence in Full Dataset : 4047

Average sequence length: 146.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03358	Q0BYQ2_HYPNA_32_115	92.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03358	C3DJB6_BACTS_1_64	99.9

Sequence based PCA Plot of the family - PF03358 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=2 Length=17
Motif2 Start=92 Length=8
Motif3 Start=76 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay