3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07195

Details:

PFam ID : PF07195

PFam Domain Description : Flagellar hook-associated protein 2 C-terminus

Number of Sequence in 50% Dataset : 369

Number of Sequence in Full Dataset : 723

Average sequence length: 240.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07195	B0TE02_HELMI_234_315	90.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07195	A8KHX5_YEREN_269_411	99.8

Sequence based PCA Plot of the family - PF07195 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=3 Length=28
Motif2 Start=57 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay