3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08644 Details: PFam ID : PF08644 PFam Domain Description : FACT complex subunit (SPT16/CDC68) Number of Sequence in 50% Dataset : 30 Number of Sequence in Full Dataset : 114 Average sequence length: 145.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08644B4ITX8_DROYA_518_56786.2 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08644F0V8K2_NEOCA_294_468100 Sequence based PCA Plot of the family - PF08644 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=41 Length=8Motif2 Start=66 Length=8Motif3 Start=13 Length=11Motif4 Start=143 Length=11 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF08644
PFam Domain Description : FACT complex subunit (SPT16/CDC68)
Number of Sequence in 50% Dataset : 30
Number of Sequence in Full Dataset : 114
Average sequence length: 145.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER