Superfamily : 81442 [ Cytochrome c oxidase subunit I-like ]
Class : Membrane and cell surface proteins and peptides
Fold : Cytochrome c oxidase subunit I-like
# of Members : 2
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d3s8ga-  (   9 )        svyaypEKkATlyFLvlGFlALivGslFgpfqAlNyGnvdaYplLk
d7coha-  (   2 )    finrwlfStNHKDIGtlYllfGawAgmvGtalslliRaELgq-----pgt
                              aaaaaaaaaaaaaaaaaaaa  aaaaaaa           

                             60        70        80        90        100 
d3s8ga-  (  58 )    llpfVqsYyQGlTLhgVlnaiVFTQLFA-QAIMVYLPAreLnmrP--nmg
d7coha-  (  47 )    llgddqiYnvvvTahaFVmiFFmVMPiMigGFGNWLVPLMIGApdMafpr
                           aaaaaaaaaaaaa   aaaaa   aaaaaaaaa        aa

                             110       120       130       140       150 
d3s8ga-  ( 105 )    lMwlSwwmAfiGlvvFalPLla-neATVlyTfyPplkG--------hwaF
d7coha-  (  97 )    mNnmSFwlLppSFllLlassmveaGAGTGwTVyPplAgnlahagaSVdlT
                    aaaaaaa aaaaaaaaaaaaa                          aaa

                             160       170       180       190       200 
d3s8ga-  ( 146 )    YlGasvFvlSTwvSiyIVldLwrrwk-aanpgkvTplVTYMAVVFWlMWf
d7coha-  ( 147 )    IfSLhlAgvSsilgAiNFitTIinmkppAmsqyqTpLFVWSVmiTAvLLl
                    aaaaaaaaaaaaaaaaaaaaaaaa            aaaaaaaaaaaaaa

                             210       220       230       240       250 
d3s8ga-  ( 195 )    lASlGlvlEavlfLlpWSfglv------eGVdplVArTLfwwTghPivyF
d7coha-  ( 197 )    lSLpvLaaGItm-LltdRnlnttfFdpagggdpilYqhlFwfFGHPEvyI
                    aaaaaaaaaaaa aaaaa              aaaaaaaaaaaa aaaaa

                             260       270       280       290       300 
d3s8ga-  ( 239 )    wlLPAYAIIYTILPkqAgG-kLvsdpmARlAFLlFLllSTPVGFhhQFaD
d7coha-  ( 246 )    LiLPGFGMIShIVtyySgkkepfgymgMVwAMmsIGflGfiVwAhhMFtv
                    aaaaaaaaaaa aaaa        aaaaaaaaaaaaaa    3333    

                             310       320       330       340       350 
d3s8ga-  ( 288 )    pgIdptwkmiHSvltlfVavPslmTaftvaaSlefAGrlrggrglfgwia
d7coha-  ( 296 )    -gmdvdtrayftsAtmiiaiPtgvKvfsWlaTlh-------------gGn
                        aaaaaaaaaaaaa  aaaaaaaaaaaaaa                 

                             360       370       380       390       400 
d3s8ga-  ( 339 )    LpwdnPAFVAPvLGllGfipGgaggivnAsftlDyvVhntAwvpGhfhLq
d7coha-  ( 332 )    ikw-sPAMmWAlgFifLftvGgltgivlAnsslDivLhdtYyvvAhfhYv
                         aaaaaaaaaaaaaaaaaaaaaaa     aaaa    aaaaaaaaa

                             410       420       430       440       450 
d3s8ga-  ( 389 )    vaSLVTLTAMGSLywLLpnLTGkpisdaqrrlGlaVVwlWflGMmimavG
d7coha-  ( 381 )    lsMGAvFAImGGfVHWFpLfsgytLn---dtwAkiHfaimfvGVnmTffp
                        aaaaaaaa   aaaaaa        aaaaaaaaaaaaaaaaaaa  

                             460       470       480       490       500 
d3s8ga-  ( 439 )    LhwAGllnVprrayIAqvpdayphAavPmvfNvlAGivllvALllFiygL
d7coha-  ( 428 )    QhfLGlsgMprrysdYp-----daytmwNtiSsmGsfisltAvmlmvfIi
                    aaaaaa                333aaaaaaaaaaaaaaaaaaaaaaaaa

                             510       520       530       540       550 
d3s8ga-  ( 489 )    fsvllsrerkpelAeapLpfAevisgpedrrlvlaMdrIgfwfavAailV
d7coha-  ( 473 )    weAfaskrevl-----------------------------tvdltttnlE
                    aaaa                                              

                             560       570  
d3s8ga-  ( 539 )    vlAYgptlvqlfghlnpvpGwrlw
d7coha-  ( 494 )    WlngCpPpyhTfee----ptyvnl
                                            

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Bacterial ba3 type cytochrome c oxidase subunit ICytochrome c oxidase subunit I-likeThermus thermophilus [TaxId: 274]view
Mitochondrial cytochrome c oxidase, subunit ICytochrome c oxidase subunit I-likeCow (Bos taurus) [TaxId: 9913]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570
- - - - S V Y A Y P E K K A T L Y F L V L G F L A L I V G S L F G P F Q A L N Y G N V D A Y P L L K L L P F V Q S Y Y Q G L T L H G V L N A I V F T Q L F A - Q A I M V Y L P A R E L N M R P - - N M G L M W L S W W M A F I G L V V F A L P L L A - N E A T V L Y T F Y P P L K G - - - - - - - - H W A F Y L G A S V F V L S T W V S I Y I V L D L W R R W K - A A N P G K V T P L V T Y M A V V F W L M W F L A S L G L V L E A V L F L L P W S F G L V - - - - - - E G V D P L V A R T L F W W T G H P I V Y F W L L P A Y A I I Y T I L P K Q A G G - K L V S D P M A R L A F L L F L L L S T P V G F H H Q F A D P G I D P T W K M I H S V L T L F V A V P S L M T A F T V A A S L E F A G R L R G G R G L F G W I A L P W D N P A F V A P V L G L L G F I P G G A G G I V N A S F T L D Y V V H N T A W V P G H F H L Q V A S L V T L T A M G S L Y W L L P N L T G K P I S D A Q R R L G L A V V W L W F L G M M I M A V G L H W A G L L N V P R R A Y I A Q V P D A Y P H A A V P M V F N V L A G I V L L V A L L L F I Y G L F S V L L S R E R K P E L A E A P L P F A E V I S G P E D R R L V L A M D R I G F W F A V A A I L V V L A Y G P T L V Q L F G H L N P V P G W R L W
F I N R W L F S T N H K D I G T L Y L L F G A W A G M V G T A L S L L I R A E L G Q - - - - - P G T L L G D D Q I Y N V V V T A H A F V M I F F M V M P I M I G G F G N W L V P L M I G A P D M A F P R M N N M S F W L L P P S F L L L L A S S M V E A G A G T G W T V Y P P L A G N L A H A G A S V D L T I F S L H L A G V S S I L G A I N F I T T I I N M K P P A M S Q Y Q T P L F V W S V M I T A V L L L L S L P V L A A G I T M - L L T D R N L N T T F F D P A G G G D P I L Y Q H L F W F F G H P E V Y I L I L P G F G M I S H I V T Y Y S G K K E P F G Y M G M V W A M M S I G F L G F I V W A H H M F T V - G M D V D T R A Y F T S A T M I I A I P T G V K V F S W L A T L H - - - - - - - - - - - - - G G N I K W - S P A M M W A L G F I F L F T V G G L T G I V L A N S S L D I V L H D T Y Y V V A H F H Y V L S M G A V F A I M G G F V H W F P L F S G Y T L N - - - D T W A K I H F A I M F V G V N M T F F P Q H F L G L S G M P R R Y S D Y P - - - - - D A Y T M W N T I S S M G S F I S L T A V M L M V F I I W E A F A S K R E V L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T V D L T T T N L E W L N G C P P P Y H T F E E - - - - P T Y V N L

 

 

 

 

 

Member Chain UniProtKB GO term