Superfamily : 52943 [ ATP synthase (F1-ATPase), gamma subunit ]
Class : Alpha and beta proteins (a/b)
Fold : Pyruvate kinase C-terminal domain-like
# of Members : 4
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1fs0g-  (  19 )          kitkamemvaaskmrkSqdrmaasrpyAetmrkvIghLahy---
d2jdig-  (   1 )           atlkdItrrlksikniqkitksmkmvAaakyaraereLkpArv
d5ik2g-  (   2 )    qgmreIkrrirsvkntrqitkamkmvAaaklrrAqetaenarpyadkike
d6rdps-  (  39 )     snqavkqriraiknigkitkamkmvAaskmknaqiaVeqsrglvdpFvr
                           aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

                             60        70        80        90        100 
d1fs0g-  (  64 )    ------------khpYledrdvkrVGYLVVSTdrglCgglninLFkkLla
d2jdig-  (  44 )    yGv-------------------gliigVS--SdrglCg----aIhssVai
d5ik2g-  (  52 )    vISSIAagtkdfshpmLearpvkkTGYMVITSdrglAgpYnanIlrlVsk
d6rdps-  (  88 )    lFgdfp------------avnSnkSVVVAVTSdkglCggLNsnItkyTra
                    a                       bbbbbb         aaaaaaaaaaa

                             110       120       130       140       150 
d1fs0g-  ( 102 )    emktwtd-kgvqCdLAMIgskGvsfFnsvg-gnvvaqvtgMgd-nPslse
d2jdig-  ( 106 )    ---------------iGVGdkirsil--------tfk--evGrrpptfgd
d5ik2g-  ( 102 )    tieerhqskde-YvIFAVgrkGrdfFkkrg-ypVveevtgisd-tPslte
d6rdps-  ( 126 )    tLatte-segKdVvVVSIGdkGrsqLtriesqryqlaiadTykvrVtfgq
                    aa          bbbbbb aaaaaa        bbbbb          aa

                             160       170       180       190       200 
d1fs0g-  ( 149 )    LigpVkvMLqAYdegrLDkLyiVsNkfintmsqvptIsqLLPLp-----k
d2jdig-  ( 141 )    Asvia-lel-----------siifNrFrsvisykte--------------
d5ik2g-  ( 149 )    IqdIAqsAIgmFadetFDkLTIFyNefvspivqrpvekqLLpLtseeVld
d6rdps-  ( 175 )    Aslie-eLikh----nPqSYQILFNkFrsaisfkptvaTILsPdllEkql
                    aaaaa aa           bbbbbbbb     bbbbbbbbb         

                             210       220       230       240       250 
d1fs0g-  ( 201 )    hk-------swdylyepd-------pkalldtlLrryVesqVyqgVVeNL
d2jdig-  ( 207 )    --------------------yslaniiyySLKEStTSEQSaRmtaMdnas
d5ik2g-  ( 199 )    gp-------vsayeyepdsesvlevlLpkYAETlIysaLLdAkASEFGaR
d6rdps-  ( 221 )    edvtgNsLdaydieashersdvLrdltefhLgVTLyNAMlENnCSEhAsr
                                        aaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

                             260       270       280       290   
d1fs0g-  ( 237 )    ASEqaarmvamk                                 
d2jdig-  ( 237 )    knasemidkltltfnrtrqavitkelieiisgaaald        
d5ik2g-  ( 242 )    mtaMgnatdnatemletLtlqfnrarqaaitqeiaeivaganalr
d6rdps-  ( 271 )    msaMenstksagemlgkltldynrkrqatittelieiiagasalm
                    aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
 

 

Domain IDNameFamilySourceDomainSTRING-DB
F1 ATP synthase gamma subunitATP synthase (F1-ATPase), gamma subunitEscherichia coli [TaxId: 562]view
F1 ATP synthase gamma subunitATP synthase (F1-ATPase), gamma subunitCow (Bos taurus) [TaxId: 9913]view
automated matchesautomated matchesCaldalkalibacillus thermarum [TaxId: 986075]view
automated matchesautomated matchesPolytomella sp. [TaxId: 37502]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
- - - - - - K I T K A M E M V A A S K M R K S Q D R M A A S R P Y A E T M R K V I G H L A H Y - - - - - - - - - - - - - - - K H P Y L E D R D V K R V G Y L V V S T D R G L C G G L N I N L F K K L L A E M K T W T D - K G V Q C D L A M I G S K G V S F F N S V G - G N V V A Q V T G M G D - N P S L S E L I G P V K V M L Q A Y D E G R L D K L Y I V S N K F I N T M S Q V P T I S Q L L P L P - - - - - K H K - - - - - - - S W D Y L Y E P D - - - - - - - P K A L L D T L L R R Y V E S Q V Y Q G V V E N L A S E Q A A R M V A M K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - A T L K D I T R R L K S I K N I Q K I T K S M K M V A A A K Y A R A E R E L K P A R V Y G V - - - - - - - - - - - - - - - - - - - G L I I G V S - - S D R G L C G - - - - A I H S S V A I - - - - - - - - - - - - - - - I G V G D K I R S I L - - - - - - - - T F K - - E V G R R P P T F G D A S V I A - L E L - - - - - - - - - - - S I I F N R F R S V I S Y K T E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y S L A N I I Y Y S L K E S T T S E Q S A R M T A M D N A S K N A S E M I D K L T L T F N R T R Q A V I T K E L I E I I S G A A A L D - - - - - - - -
Q G M R E I K R R I R S V K N T R Q I T K A M K M V A A A K L R R A Q E T A E N A R P Y A D K I K E V I S S I A A G T K D F S H P M L E A R P V K K T G Y M V I T S D R G L A G P Y N A N I L R L V S K T I E E R H Q S K D E - Y V I F A V G R K G R D F F K K R G - Y P V V E E V T G I S D - T P S L T E I Q D I A Q S A I G M F A D E T F D K L T I F Y N E F V S P I V Q R P V E K Q L L P L T S E E V L D G P - - - - - - - V S A Y E Y E P D S E S V L E V L L P K Y A E T L I Y S A L L D A K A S E F G A R M T A M G N A T D N A T E M L E T L T L Q F N R A R Q A A I T Q E I A E I V A G A N A L R
- S N Q A V K Q R I R A I K N I G K I T K A M K M V A A S K M K N A Q I A V E Q S R G L V D P F V R L F G D F P - - - - - - - - - - - - A V N S N K S V V V A V T S D K G L C G G L N S N I T K Y T R A T L A T T E - S E G K D V V V V S I G D K G R S Q L T R I E S Q R Y Q L A I A D T Y K V R V T F G Q A S L I E - E L I K H - - - - N P Q S Y Q I L F N K F R S A I S F K P T V A T I L S P D L L E K Q L E D V T G N S L D A Y D I E A S H E R S D V L R D L T E F H L G V T L Y N A M L E N N C S E H A S R M S A M E N S T K S A G E M L G K L T L D Y N R K R Q A T I T T E L I E I I A G A S A L M

 

 

 

 

 

Member Chain UniProtKB GO term
d1fs0g_ G P0A6E6 GO:0015986
d1fs0g_ G P0A6E6 GO:0045261
d1fs0g_ G P0A6E6 GO:0046933
d1fs0g_ G P0ABA6 GO:0015986
d1fs0g_ G P0ABA6 GO:0045261
d1fs0g_ G P0ABA6 GO:0046933
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in