Superfamily : 48439 [ Protein prenylyltransferase ]
Class : All alpha proteins
Fold : alpha-alpha superhelix
# of Members : 5
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1dcea1  (   2 )                                             hgrlkvaal
d2h6fa1  (  55 )    fvsLdspsYvlYrdra-eWadIdpvpqndgp----npvvqi----iysdk
d3sfxa-  (   5 )           tyipMsqrr-swadVkpimqddgp----npvvpi----mysee
d4l9pa-  (   3 )             gkyssdp-eWasikpielndgsdfgamplati----syspe
d4ydea-  (   2 )                tdskydYsditpvdintee----pqicqi----lyded
                                                                    aa

                             60        70        80        90        100 
d1dcea1  (  28 )    yqsatqaVfqkrqageldesVlelTsqILganPdfatLWnCRreVlqhLe
d2h6fa1  (  96 )    frDVYdYFrAVlqrderserAfkLTrDAIelnAanytVWhFRrvLLksl-
d3sfxa-  (  39 )    ykdAmDYFraIaakeekserAleLTeiIVrmnpahytVWqyRfsLLtsl-
d4l9pa-  (  39 )    yleAtsYLrAVmaanemserAlrLTgdIIsmnpahytVWiYrakILfal-
d4ydea-  (  32 )    ykqiMgiLlsLmkaeeyserAlhITelGInelashytIWiYRfnILknlp
                    aaaaaaaaaaaaa     aaaaaaaaaaaaa    aaaaaaaaaaaaa  

                             110       120       130       140       150 
d1dcea1  (  78 )    tekspeesaalvkaELgfLesCLrvnpkSygTWhHRcwLLsrlp-----e
d2h6fa1  ( 145 )    --------qkdlheEMnyItaiIeeqpknyqVWhHRrvLVewl-----r-
d3sfxa-  (  88 )    --------nksledElrlMneFavqnlksyqVwhHRllLLdri-----sp
d4l9pa-  (  88 )    --------gkdLneEiewLnkvAlkhlknyqIWhHRqvLMssra---hFp
d4ydea-  (  82 )    --------nrnLydeLdwCeeiAldneknyqIWnYRqlIIgqImelnnnd
                               aaaaaaaaaaaaaa     aaaaaaaaaaa         

                             160       170       180       190       200 
d1dcea1  ( 123 )    pnwarEleLCarfleadernfhCwdYrrfVaaqaava-------paeEla
d2h6fa1  ( 181 )    -dpsqElefIadILnqdakNyhAwqHRqwVIqefklwd--------nElq
d3sfxa-  ( 125 )    qdPvsEIeyIhgsLlpdpknyhTWaYLhwLYshFstlgrIseaqwgsEld
d4l9pa-  ( 127 )    tlpprEQdfLmeMFaqdaksyhVwtYRhwLVrhFklwd------hprEiq
d4ydea-  ( 124 )    FdpyrEfpILeaMLssdpkNhhVwsYRkwLVdtfdLHn------dakEls
                         aaaaaaaaaaa    aaaaaaaaaaaaaa           aaaaa

                             210       220       230       240       250 
d1dcea1  ( 166 )    fTdslitrnfsnysSWhYRscLLpqlhpqpds--------------gpqg
d2h6fa1  ( 222 )    yVdqlLkedvrNnsVWnQRyfVIsnttgyn--------------------
d3sfxa-  ( 175 )    wCnemLrvdgrNnsAWgWRwyLrVsrp-------------------gAe-
d4l9pa-  ( 171 )    DVealLkadvrNnsAWnHRymLrFGprdenefdaglhnttgpssekGrlp
d4ydea-  ( 168 )    fVdkvIdtdlkNnsAWsHRffLlFskkhlAt-------------------
                    aaaaaaaa    aaaaaaaaaaaa                          

                             260       270       280       290       300 
d1dcea1  ( 202 )    rLpenvLlkELelVqnaFftdpndqSAWfyHrwLlgraeplfrCeLsveK
d2h6fa1  ( 252 )    --dravlerEvqyTlemiklvphNesAWnyLkgILqdr----gLskypnL
d3sfxa-  ( 205 )    -tssrslqdELiyILksIhliPhnvsAWnyLrgFLkhf----sl-plvpi
d4l9pa-  ( 221 )    vvdedlVdsELqySqsrIleapenrsPWsYArgVLqAA----gr-plseW
d4ydea-  ( 199 )    ---dntIdeelnyVkdkIvkcpqNpSTWnYLlgIHerf----dr-sitqL
                       aaaaaaaaaaaaaaaaa    aaaaaaaaaaa               

                             310       320       330       340       350 
d1dcea1  ( 361 )    stvLqsE--LesCkelqelep-enkwCLlTIIlLMraLd------pllye
d2h6fa1  ( 296 )    lnqLldlqp-----------shsspyLIaFLVdIYedmLenqcdnkedil
d3sfxa-  ( 249 )    lpAIlpYTafpmPsplpedTplpVplAleYlAdSfieqn---------rv
d4l9pa-  ( 266 )    kdfArsFva------------VkSshAIeWLAdVyAeed-----gsegsa
d4ydea-  ( 241 )    eefSlqFVdle-------kdqVtSsfALeTLAkIytqqk---------ky
                    aaaa                    aaaaaaaaaaaaa            a

                             360       370       380       390 
d1dcea1  ( 402 )    keTlqyFstLka-vdpmraayLddlrskflleNsvlkmeyadv
d2h6fa1  ( 335 )    nkAlelCeiLAkekdtirkeyWryigrsLqskhst        
d3sfxa-  ( 305 )    ddAakvFekLsseydqmragyWefrrreca             
d4l9pa-  ( 311 )    aeAvkMLtlLkekydpirrnyWeyrirqItasaahatei    
d4ydea-  ( 275 )    neSrtVYdlLkskydpirsnfWdyqiskLt             
                    aaaaaaaaaaaa   333aaaaaaaaaaa              

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Rab geranylgeranyltransferase alpha-subunit, N-terminal domainProtein prenylyltransferaseNorway rat (Rattus norvegicus) [TaxId: 10116]view
Protein farnesyltransferase alpha-subunitProtein prenylyltransferaseHuman (Homo sapiens) [TaxId: 9606]view
automated matchesautomated matchesCryptococcus neoformans [TaxId: 235443]view
automated matchesautomated matchesAspergillus fumigatus [TaxId: 330879]view
automated matchesautomated matchesCandida albicans [TaxId: 237561]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H G R L K V A A L Y Q S A T Q A V F Q K R Q A G E L D E S V L E L T S Q I L G A N P D F A T L W N C R R E V L Q H L E T E K S P E E S A A L V K A E L G F L E S C L R V N P K S Y G T W H H R C W L L S R L P - - - - - E P N W A R E L E L C A R F L E A D E R N F H C W D Y R R F V A A Q A A V A - - - - - - - P A E E L A F T D S L I T R N F S N Y S S W H Y R S C L L P Q L H P Q P D S - - - - - - - - - - - - - - G P Q G R L P E N V L L K E L E L V Q N A F F T D P N D Q S A W F Y H R W L L G R A E P L F R C E L S V E K S T V L Q S E - - L E S C K E L Q E L E P - E N K W C L L T I I L L M R A L D - - - - - - P L L Y E K E T L Q Y F S T L K A - V D P M R A A Y L D D L R S K F L L E N S V L K M E Y A D V
F V S L D S P S Y V L Y R D R A - E W A D I D P V P Q N D G P - - - - N P V V Q I - - - - I Y S D K F R D V Y D Y F R A V L Q R D E R S E R A F K L T R D A I E L N A A N Y T V W H F R R V L L K S L - - - - - - - - - Q K D L H E E M N Y I T A I I E E Q P K N Y Q V W H H R R V L V E W L - - - - - R - - D P S Q E L E F I A D I L N Q D A K N Y H A W Q H R Q W V I Q E F K L W D - - - - - - - - N E L Q Y V D Q L L K E D V R N N S V W N Q R Y F V I S N T T G Y N - - - - - - - - - - - - - - - - - - - - - - D R A V L E R E V Q Y T L E M I K L V P H N E S A W N Y L K G I L Q D R - - - - G L S K Y P N L L N Q L L D L Q P - - - - - - - - - - - S H S S P Y L I A F L V D I Y E D M L E N Q C D N K E D I L N K A L E L C E I L A K E K D T I R K E Y W R Y I G R S L Q S K H S T - - - - - - - -
- - - - - - - T Y I P M S Q R R - S W A D V K P I M Q D D G P - - - - N P V V P I - - - - M Y S E E Y K D A M D Y F R A I A A K E E K S E R A L E L T E I I V R M N P A H Y T V W Q Y R F S L L T S L - - - - - - - - - N K S L E D E L R L M N E F A V Q N L K S Y Q V W H H R L L L L D R I - - - - - S P Q D P V S E I E Y I H G S L L P D P K N Y H T W A Y L H W L Y S H F S T L G R I S E A Q W G S E L D W C N E M L R V D G R N N S A W G W R W Y L R V S R P - - - - - - - - - - - - - - - - - - - G A E - - T S S R S L Q D E L I Y I L K S I H L I P H N V S A W N Y L R G F L K H F - - - - S L - P L V P I L P A I L P Y T A F P M P S P L P E D T P L P V P L A L E Y L A D S F I E Q N - - - - - - - - - R V D D A A K V F E K L S S E Y D Q M R A G Y W E F R R R E C A - - - - - - - - - - - - -
- - - - - - - - - G K Y S S D P - E W A S I K P I E L N D G S D F G A M P L A T I - - - - S Y S P E Y L E A T S Y L R A V M A A N E M S E R A L R L T G D I I S M N P A H Y T V W I Y R A K I L F A L - - - - - - - - - G K D L N E E I E W L N K V A L K H L K N Y Q I W H H R Q V L M S S R A - - - H F P T L P P R E Q D F L M E M F A Q D A K S Y H V W T Y R H W L V R H F K L W D - - - - - - H P R E I Q D V E A L L K A D V R N N S A W N H R Y M L R F G P R D E N E F D A G L H N T T G P S S E K G R L P V V D E D L V D S E L Q Y S Q S R I L E A P E N R S P W S Y A R G V L Q A A - - - - G R - P L S E W K D F A R S F V A - - - - - - - - - - - - V K S S H A I E W L A D V Y A E E D - - - - - G S E G S A A E A V K M L T L L K E K Y D P I R R N Y W E Y R I R Q I T A S A A H A T E I - - - -
- - - - - - - - - - - - T D S K Y D Y S D I T P V D I N T E E - - - - P Q I C Q I - - - - L Y D E D Y K Q I M G I L L S L M K A E E Y S E R A L H I T E L G I N E L A S H Y T I W I Y R F N I L K N L P - - - - - - - - N R N L Y D E L D W C E E I A L D N E K N Y Q I W N Y R Q L I I G Q I M E L N N N D F D P Y R E F P I L E A M L S S D P K N H H V W S Y R K W L V D T F D L H N - - - - - - D A K E L S F V D K V I D T D L K N N S A W S H R F F L L F S K K H L A T - - - - - - - - - - - - - - - - - - - - - - D N T I D E E L N Y V K D K I V K C P Q N P S T W N Y L L G I H E R F - - - - D R - S I T Q L E E F S L Q F V D L E - - - - - - - K D Q V T S S F A L E T L A K I Y T Q Q K - - - - - - - - - K Y N E S R T V Y D L L K S K Y D P I R S N F W D Y Q I S K L T - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1dcea1 A Q08602 GO:0004659
d1dcea1 A Q08602 GO:0004659
d1dcea1 A Q08602 GO:0004661
d1dcea1 A Q08602 GO:0004661
d1dcea1 A Q08602 GO:0004663
d1dcea1 A Q08602 GO:0004663
d1dcea1 A Q08602 GO:0005515
d1dcea1 A Q08602 GO:0005515
d1dcea1 A Q08602 GO:0005737
d1dcea1 A Q08602 GO:0005737
d1dcea1 A Q08602 GO:0005968
d1dcea1 A Q08602 GO:0005968
d1dcea1 A Q08602 GO:0008270
d1dcea1 A Q08602 GO:0008270
d1dcea1 A Q08602 GO:0008318
d1dcea1 A Q08602 GO:0008318
d1dcea1 A Q08602 GO:0018342
d1dcea1 A Q08602 GO:0018342
d1dcea1 A Q08602 GO:0018344
d1dcea1 A Q08602 GO:0018344
d1dcea1 A Q08602 GO:0031267
d1dcea1 A Q08602 GO:0031267
d1dcea1 A Q08603 GO:0004659
d1dcea1 A Q08603 GO:0004659
d1dcea1 A Q08603 GO:0004661
d1dcea1 A Q08603 GO:0004661
d1dcea1 A Q08603 GO:0004663
d1dcea1 A Q08603 GO:0004663
d1dcea1 A Q08603 GO:0005515
d1dcea1 A Q08603 GO:0005515
d1dcea1 A Q08603 GO:0005737
d1dcea1 A Q08603 GO:0005737
d1dcea1 A Q08603 GO:0005968
d1dcea1 A Q08603 GO:0005968
d1dcea1 A Q08603 GO:0008270
d1dcea1 A Q08603 GO:0008270
d1dcea1 A Q08603 GO:0008318
d1dcea1 A Q08603 GO:0008318
d1dcea1 A Q08603 GO:0018342
d1dcea1 A Q08603 GO:0018342
d1dcea1 A Q08603 GO:0018344
d1dcea1 A Q08603 GO:0018344
d1dcea1 A Q08603 GO:0031267
d1dcea1 A Q08603 GO:0031267
d2h6fa1 A P49354 GO:0004659
d2h6fa1 A P49354 GO:0004660
d2h6fa1 A P49354 GO:0004661
d2h6fa1 A P49354 GO:0004662
d2h6fa1 A P49354 GO:0004663
d2h6fa1 A P49354 GO:0005515
d2h6fa1 A P49354 GO:0005737
d2h6fa1 A P49354 GO:0005829
d2h6fa1 A P49354 GO:0005875
d2h6fa1 A P49354 GO:0005886
d2h6fa1 A P49354 GO:0005953
d2h6fa1 A P49354 GO:0005965
d2h6fa1 A P49354 GO:0007167
d2h6fa1 A P49354 GO:0007179
d2h6fa1 A P49354 GO:0007528
d2h6fa1 A P49354 GO:0008017
d2h6fa1 A P49354 GO:0008318
d2h6fa1 A P49354 GO:0018342
d2h6fa1 A P49354 GO:0018343
d2h6fa1 A P49354 GO:0018344
d2h6fa1 A P49354 GO:0030971
d2h6fa1 A P49354 GO:0035022
d2h6fa1 A P49354 GO:0043014
d2h6fa1 A P49354 GO:0060090
d2h6fa1 A P49354 GO:0071340
d2h6fa1 A P49354 GO:0090044
d2h6fa1 A P49354 GO:0090045
d2h6fa1 A P49354 GO:1904395
d2h6fa1 A P49356 GO:0004659
d2h6fa1 A P49356 GO:0004660
d2h6fa1 A P49356 GO:0004661
d2h6fa1 A P49356 GO:0004662
d2h6fa1 A P49356 GO:0004663
d2h6fa1 A P49356 GO:0005515
d2h6fa1 A P49356 GO:0005737
d2h6fa1 A P49356 GO:0005829
d2h6fa1 A P49356 GO:0005875
d2h6fa1 A P49356 GO:0005886
d2h6fa1 A P49356 GO:0005953
d2h6fa1 A P49356 GO:0005965
d2h6fa1 A P49356 GO:0007167
d2h6fa1 A P49356 GO:0007179
d2h6fa1 A P49356 GO:0007528
d2h6fa1 A P49356 GO:0008017
d2h6fa1 A P49356 GO:0008318
d2h6fa1 A P49356 GO:0018342
d2h6fa1 A P49356 GO:0018343
d2h6fa1 A P49356 GO:0018344
d2h6fa1 A P49356 GO:0030971
d2h6fa1 A P49356 GO:0035022
d2h6fa1 A P49356 GO:0043014
d2h6fa1 A P49356 GO:0060090
d2h6fa1 A P49356 GO:0071340
d2h6fa1 A P49356 GO:0090044
d2h6fa1 A P49356 GO:0090045
d2h6fa1 A P49356 GO:1904395