Superfamily : 47729 [ IHF-like DNA-binding proteins ]
Class : All alpha proteins
Fold : IHF-like DNA-binding proteins
# of Members : 9
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1exea-  (   1 )          mnktelikaiaqdtgl-----tqvsvskmlasfekiitetvakg
d1owfa-  (   2 )         altkaemseylfdkl-----glskrdAkelVelffeeirraleng
d1owfb-  (   1 )          mtkselierlatqqs----hipaktvedaVkemlehmastlaqg
d2ndpa-  (   1 )    makikslsAaeylkemadetni-----kvqdirlvvtslqkvlakelatt
d2np2a-  (   6 )       rpkvtksdiVdqialniknnnlklekkyIrlvidaffeelksnlcsn
d3c4ia-  (   1 )          mnkaelIdvltqkl-----gsdrrqAtaavenvvdtivravhkg
d4p3va-  (   1 )          mnksqlidkiaaga-----diskaaAgraldaiiasvteslkeg
d6lmha-  (  12 )       kptitkqelyslvaadt-----qlnkalieriftsqqkiiqnalkhn
                            aaaaaaaaaaa         aaaaaaaaaaaaaaaaaaaa  

                             60        70        80        90        100 
d1exea-  (  40 )    dkvqltgflnikPvarqarkgfnpq------tqealeiapsvgvsvkpge
d1owfa-  (  42 )    eqvklsgfgnfdlrdknqr-p--grnpktge---dipitarrvvtfrpgq
d1owfb-  (  41 )    eriairgfgsfslhyrapr-t--grnpktgd---kvelegkyvphfkpgk
d2ndpa-  (  46 )    gevrlfdigkfklvttkprtgi---npk---tkqkiqipagkkikltvsk
d2np2a-  (  53 )    nviefrsfGtfevrkrkGrln--arnpqtge---yvkvldhhvayfrpgk
d3c4ia-  (  40 )    dsvtitgfGvfeqrrraar-v--arnprtge---tvkvkptsvpafrpga
d4p3va-  (  40 )    ddvalvgfgtfava---------------------------kvpsfa-gk
d6lmha-  (  54 )    qeviippgikftvvtvkakparqghnpatgepiqikakpehkavkiraLk
                      bbb   bbbbbbbb                        bbbbbbbb a

                             110    
d1exea-  (  84 )    slkkaaeglkyedfak
d1owfa-  (  86 )    klksrvenaspk    
d1owfb-  (  85 )    elrdrani----yg  
d2ndpa-  (  90 )    iltda----vdshk  
d2np2a-  (  98 )    dlkervwg----i   
d3c4ia-  (  84 )    qfkavvsgalpaeg  
d4p3va-  (  84 )    alkdavn         
d6lmha-  ( 104 )    pvhdmln         
                    aaaaa           

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Transcription factor 1, TF1Prokaryotic DNA-bending proteinBacteriophage SPO1 [TaxId: 10685]view
Integration host factor alpha subunit (IHFA)Prokaryotic DNA-bending proteinEscherichia coli [TaxId: 562]view
Integration host factor beta subunit (IHFB)Prokaryotic DNA-bending proteinEscherichia coli [TaxId: 562]view
automated matchesautomated matchesMycoplasma gallisepticum [TaxId: 1006581]view
automated matchesautomated matchesLyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]view
automated matchesautomated matchesMycobacterium tuberculosis [TaxId: 1773]view
HU proteinProkaryotic DNA-bending proteinEscherichia coli, beta-isoform [TaxId: 562]view
automated matchesautomated matchesAfrican swine fever virus [TaxId: 10497]view
Domain ID Name
d3omya-3omy A:
FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110
- - - - - - M N K T E L I K A I A Q D T G L - - - - - T Q V S V S K M L A S F E K I I T E T V A K G D K V Q L T G F L N I K P V A R Q A R K G F N P Q - - - - - - T Q E A L E I A P S V G V S V K P G E S L K K A A E G L K Y E D F A K
- - - - - A L T K A E M S E Y L F D K L - - - - - G L S K R D A K E L V E L F F E E I R R A L E N G E Q V K L S G F G N F D L R D K N Q R - P - - G R N P K T G E - - - D I P I T A R R V V T F R P G Q K L K S R V E N A S P K - - - -
- - - - - - M T K S E L I E R L A T Q Q S - - - - H I P A K T V E D A V K E M L E H M A S T L A Q G E R I A I R G F G S F S L H Y R A P R - T - - G R N P K T G D - - - K V E L E G K Y V P H F K P G K E L R D R A N I - - - - Y G - -
M A K I K S L S A A E Y L K E M A D E T N I - - - - - K V Q D I R L V V T S L Q K V L A K E L A T T G E V R L F D I G K F K L V T T K P R T G I - - - N P K - - - T K Q K I Q I P A G K K I K L T V S K I L T D A - - - - V D S H K - -
- - - R P K V T K S D I V D Q I A L N I K N N N L K L E K K Y I R L V I D A F F E E L K S N L C S N N V I E F R S F G T F E V R K R K G R L N - - A R N P Q T G E - - - Y V K V L D H H V A Y F R P G K D L K E R V W G - - - - I - - -
- - - - - - M N K A E L I D V L T Q K L - - - - - G S D R R Q A T A A V E N V V D T I V R A V H K G D S V T I T G F G V F E Q R R R A A R - V - - A R N P R T G E - - - T V K V K P T S V P A F R P G A Q F K A V V S G A L P A E G - -
- - - - - - M N K S Q L I D K I A A G A - - - - - D I S K A A A G R A L D A I I A S V T E S L K E G D D V A L V G F G T F A V A - - - - - - - - - - - - - - - - - - - - - - - - - - - K V P S F A - G K A L K D A V N - - - - - - - - -
- - - K P T I T K Q E L Y S L V A A D T - - - - - Q L N K A L I E R I F T S Q Q K I I Q N A L K H N Q E V I I P P G I K F T V V T V K A K P A R Q G H N P A T G E P I Q I K A K P E H K A V K I R A L K P V H D M L N - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1exea_ A P04445 GO:0003677
d1exea_ A P04445 GO:0030527
d1owfa_ A P0A6X7 GO:0000976
d1owfa_ A P0A6X7 GO:0001216
d1owfa_ A P0A6X7 GO:0003677
d1owfa_ A P0A6X7 GO:0005737
d1owfa_ A P0A6X7 GO:0005829
d1owfa_ A P0A6X7 GO:0006310
d1owfa_ A P0A6X7 GO:0006351
d1owfa_ A P0A6X7 GO:0006355
d1owfa_ A P0A6X7 GO:0006417
d1owfa_ A P0A6X7 GO:0009295
d1owfa_ A P0A6X7 GO:0030527
d1owfa_ A P0A6X7 GO:0032993
d1owfa_ A P0A6X7 GO:0043565
d1owfa_ A P0A6X7 GO:0045893
d1owfa_ A P0A6X7 GO:1990177
d1owfa_ A P0A6Y1 GO:0000976
d1owfa_ A P0A6Y1 GO:0001216
d1owfa_ A P0A6Y1 GO:0003677
d1owfa_ A P0A6Y1 GO:0005737
d1owfa_ A P0A6Y1 GO:0005829
d1owfa_ A P0A6Y1 GO:0006310
d1owfa_ A P0A6Y1 GO:0006351
d1owfa_ A P0A6Y1 GO:0006355
d1owfa_ A P0A6Y1 GO:0006417
d1owfa_ A P0A6Y1 GO:0009295
d1owfa_ A P0A6Y1 GO:0030527
d1owfa_ A P0A6Y1 GO:0032993
d1owfa_ A P0A6Y1 GO:0043565
d1owfa_ A P0A6Y1 GO:0045893
d1owfa_ A P0A6Y1 GO:1990177
d1owfa_ A P0A6X7 GO:0000976
d1owfa_ A P0A6X7 GO:0001216
d1owfa_ A P0A6X7 GO:0003677
d1owfa_ A P0A6X7 GO:0005737
d1owfa_ A P0A6X7 GO:0005829
d1owfa_ A P0A6X7 GO:0006310
d1owfa_ A P0A6X7 GO:0006351
d1owfa_ A P0A6X7 GO:0006355
d1owfa_ A P0A6X7 GO:0006417
d1owfa_ A P0A6X7 GO:0009295
d1owfa_ A P0A6X7 GO:0030527
d1owfa_ A P0A6X7 GO:0032993
d1owfa_ A P0A6X7 GO:0043565
d1owfa_ A P0A6X7 GO:0045893
d1owfa_ A P0A6X7 GO:1990177
d1owfa_ A P0A6Y1 GO:0000976
d1owfa_ A P0A6Y1 GO:0001216
d1owfa_ A P0A6Y1 GO:0003677
d1owfa_ A P0A6Y1 GO:0005737
d1owfa_ A P0A6Y1 GO:0005829
d1owfa_ A P0A6Y1 GO:0006310
d1owfa_ A P0A6Y1 GO:0006351
d1owfa_ A P0A6Y1 GO:0006355
d1owfa_ A P0A6Y1 GO:0006417
d1owfa_ A P0A6Y1 GO:0009295
d1owfa_ A P0A6Y1 GO:0030527
d1owfa_ A P0A6Y1 GO:0032993
d1owfa_ A P0A6Y1 GO:0043565
d1owfa_ A P0A6Y1 GO:0045893
d1owfa_ A P0A6Y1 GO:1990177
d1owfb_ B P0A6X7 GO:0003677
d1owfb_ B P0A6X7 GO:0005737
d1owfb_ B P0A6X7 GO:0005829
d1owfb_ B P0A6X7 GO:0006310
d1owfb_ B P0A6X7 GO:0006351
d1owfb_ B P0A6X7 GO:0006355
d1owfb_ B P0A6X7 GO:0006417
d1owfb_ B P0A6X7 GO:0030527
d1owfb_ B P0A6X7 GO:0043565
d1owfb_ B P0A6X7 GO:1990177
d1owfb_ B P0A6X7 GO:0005694
d1owfb_ B P0A6Y1 GO:0003677
d1owfb_ B P0A6Y1 GO:0005737
d1owfb_ B P0A6Y1 GO:0005829
d1owfb_ B P0A6Y1 GO:0006310
d1owfb_ B P0A6Y1 GO:0006351
d1owfb_ B P0A6Y1 GO:0006355
d1owfb_ B P0A6Y1 GO:0006417
d1owfb_ B P0A6Y1 GO:0030527
d1owfb_ B P0A6Y1 GO:0043565
d1owfb_ B P0A6Y1 GO:1990177
d1owfb_ B P0A6Y1 GO:0005694
d1owfb_ B P0A6X7 GO:0003677
d1owfb_ B P0A6X7 GO:0005737
d1owfb_ B P0A6X7 GO:0005829
d1owfb_ B P0A6X7 GO:0006310
d1owfb_ B P0A6X7 GO:0006351
d1owfb_ B P0A6X7 GO:0006355
d1owfb_ B P0A6X7 GO:0006417
d1owfb_ B P0A6X7 GO:0030527
d1owfb_ B P0A6X7 GO:0043565
d1owfb_ B P0A6X7 GO:1990177
d1owfb_ B P0A6X7 GO:0005694
d1owfb_ B P0A6Y1 GO:0003677
d1owfb_ B P0A6Y1 GO:0005737
d1owfb_ B P0A6Y1 GO:0005829
d1owfb_ B P0A6Y1 GO:0006310
d1owfb_ B P0A6Y1 GO:0006351
d1owfb_ B P0A6Y1 GO:0006355
d1owfb_ B P0A6Y1 GO:0006417
d1owfb_ B P0A6Y1 GO:0030527
d1owfb_ B P0A6Y1 GO:0043565
d1owfb_ B P0A6Y1 GO:1990177
d1owfb_ B P0A6Y1 GO:0005694