Superfamily : 47459 [ HLH, helix-loop-helix DNA-binding domain ]
Class : All alpha proteins
Fold : HLH-like
# of Members : 7
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1a0aa-  (   0 )           mkreshkhaeqarrnrlavalhelaslipaewkqqnvsaapsk
d1am9a-  ( 319 )        qsgekrtahnaiekryrssindkiielkdlVv--g-------alnk
d1an4a1  ( 197 )         dekrraqhneverrrrdkinnwivqlskiIpDss-mestksgqsk
d1mdya-  (   1 )    melkrkttnadrrkaatmrerrrlskvneafetlkr--stssnpnqrlpk
d1nlwa-  (   2 )            srsthnemeknrrahlrlsleklkglVp-------g--rhtt
d6g6ka1  ( 898 )        eenvkrrthnvlerqrrnelkrsffalRdqIp--eLenne--kApk
d6g6kb-  ( 205 )              ahhnalerkrrdhikdsfhslrdsVp--sLqge---kAsr
                               aaaaaaaaaaaaaaaaaaaaaa                 

                             60        70        80        90    
d1a0aa-  (  43 )    attveaacryirhlqqngst                         
d1am9a-  ( 360 )    saVlrkaidyirflqhsnqklkqenlslrtavhk           
d1an4a1  ( 241 )    ggIlskasdyiqelrqsnhr                         
d1mdya-  ( 147 )    veIlrnairyieglqallrd                         
d1nlwa-  (  40 )    lslltkaklhikkledsdrkavh-idqlqreqrhlkrqle     
d6g6ka1  ( 940 )    vvIlkkatayilsvqaeeqkliseedllrkrreqlkhkleqlrns
d6g6kb-  ( 240 )    aqIldkateyiqymrrknhthqqdiddlkrqnalleqqvra    
                    aaaaaaaaaaaaaaaa                             

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Pho4 B/HLH domainHLH, helix-loop-helix DNA-binding domainBaker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]view
SREBP-1aHLH, helix-loop-helix DNA-binding domainHuman (Homo sapiens) [TaxId: 9606]view
Usf B/HLH domainHLH, helix-loop-helix DNA-binding domainHuman (Homo sapiens) [TaxId: 9606]view
Myod B/HLH domainHLH, helix-loop-helix DNA-binding domainMouse (Mus musculus) [TaxId: 10090]view
Mad proteinHLH, helix-loop-helix DNA-binding domainHuman (Homo sapiens) [TaxId: 9606]view
automated matchesautomated matchesHuman (Homo sapiens) [TaxId: 9606]view
automated matchesHLH, helix-loop-helix DNA-binding domainHuman (Homo sapiens) [TaxId: 9606]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90
- - - - - - - M K R E S H K H A E Q A R R N R L A V A L H E L A S L I P A E W K Q Q N V S A A P S K A T T V E A A C R Y I R H L Q Q N G S T - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - Q S G E K R T A H N A I E K R Y R S S I N D K I I E L K D L V V - - G - - - - - - - A L N K S A V L R K A I D Y I R F L Q H S N Q K L K Q E N L S L R T A V H K - - - - - - - - - - -
- - - - - D E K R R A Q H N E V E R R R R D K I N N W I V Q L S K I I P D S S - M E S T K S G Q S K G G I L S K A S D Y I Q E L R Q S N H R - - - - - - - - - - - - - - - - - - - - - - - - -
M E L K R K T T N A D R R K A A T M R E R R R L S K V N E A F E T L K R - - S T S S N P N Q R L P K V E I L R N A I R Y I E G L Q A L L R D - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - S R S T H N E M E K N R R A H L R L S L E K L K G L V P - - - - - - - G - - R H T T L S L L T K A K L H I K K L E D S D R K A V H - I D Q L Q R E Q R H L K R Q L E - - - - -
- - - - E E N V K R R T H N V L E R Q R R N E L K R S F F A L R D Q I P - - E L E N N E - - K A P K V V I L K K A T A Y I L S V Q A E E Q K L I S E E D L L R K R R E Q L K H K L E Q L R N S
- - - - - - - - - - A H H N A L E R K R R D H I K D S F H S L R D S V P - - S L Q G E - - - K A S R A Q I L D K A T E Y I Q Y M R R K N H T H Q Q D I D D L K R Q N A L L E Q Q V R A - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1a0aa_ A P07270 GO:0046983
d1am9a_ A P36956 GO:0046983
d1mdya_ A P10085 GO:0006355
d1mdya_ A P10085 GO:0007517
d1mdya_ A P10085 GO:0046983
d1nlwa_ A Q05195 GO:0000122
d1nlwa_ A Q05195 GO:0046983
d1nlwa_ A P61244 GO:0000122
d1nlwa_ A P61244 GO:0046983