Superfamily : 140924 [ Duffy binding domain-like ]
Class : All alpha proteins
Fold : Duffy binding domain-like
# of Members : 3
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1zroa1  (   8 )     nevLsnçr-------------------------eKrkgm------kWdç
d1zroa2  ( 283 )    ckhTttlVksVlngndntikekRehIdlddFskFgÇdknsVdtntkvWeç
d3rrca1  ( 211 )     ntvmknÇn-------------------------yKrkrre----rdWdÇ
                                                                      

                             60        70        80        90        100 
d1zroa1  (  26 )    kkkndrs-nyvÇIPdRRiqLÇIVNLAiikTytketMkdhFieASkkESql
d1zroa2  ( 333 )    kkPyklstkdvÇVPprRqeLçLGnIdrIydknllmIkeHILAIAIYESRi
d3rrca1  ( 231 )    n-tkk----dvÇiPdrRyqlÇMkeltnlt-frklylkrkliyDAavEGdl
                                  aaaa              aaaaaaaaaaaaaaaaaa

                             110       120       130       140       150 
d1zroa1  (  75 )    LlkkndnkynskFçndLknSFlDYGHLAmGnDmDfggyStkAenkIqeVF
d1zroa2  ( 383 )    LkrkyknkddkeVçkiInkTFADIrdIIggtDyWndlsNrkLvgkIntnS
d3rrca1  ( 287 )    llklnnyrynkdFçkdirWSlgDFGDiimgtdmEgigySkvvennlrsiF
                    aaaa      aaaaaaaaaaaaaaaaaa         aaaaaaaaaa   

                             160       170       180       190       200 
d1zroa1  ( 125 )    kgahgeisehkIknfRkkwWneFrekLWeaMlseHknniÇ--knipqeel
d1zroa2  ( 433 )    nyvhr--nkqndklFrdeWwkvIkkdVwnVIswVFkdktvÇkeddienip
d3rrca1  ( 337 )    ----gtd--ekaqqrRkqwWneSkaqiwtaMMysv--çkl--nvavniep
                               aaaaaaaaaaaaaaaaaaaa                   

                             210       220       230       240       250 
d1zroa1  ( 175 )    QItQWIkeWhgeFllerdnraklPkskÇknnal---yeAc-ekeÇidPÇm
d1zroa2  ( 481 )    QfFrWFseWGddYÇqdktkmietLkv-----------eççeddnÇkrkçn
d3rrca1  ( 388 )    qiYRWireWGrdYvselptevqklkekÇdgkinytdkkvçkvppÇqnaçk
                    aaaaaaaaaaaaaaaaaaaa aaaaa                  aaaaaa

                             260       270       280       290       300 
d1zroa1  ( 221 )    kYrdWIirSkfEwhtLskeYetqkv----------pkenAenyLikisen
d1zroa2  ( 524 )    sYkewiskKkeEynkQakqYqeyqkgnnykmYseFksikPevYLkkySek
d3rrca1  ( 438 )    sYdqWitrKknqWdvlsnkFisvknaekvq---tagivtPydilkqElde
                    aaaaaaaaaaaaaaaaaaaaaaa                aaaaaaaa   

                             310       320      
d1zroa1  ( 261 )    kndAkVsllLn-nCdaeyskyÇd     
d1zroa2  ( 574 )    ÇsnlnFedEFkeelHsdyknkÇtmçpev
d3rrca1  ( 485 )    FnevaFenein-krdgayielÇvçs   
                                   aaaaaaa
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Erythrocyte binding antigen region IIDuffy binding domainMalaria parasite (Plasmodium falciparum) [TaxId: 5833]view
Erythrocyte binding antigen region IIDuffy binding domainMalaria parasite (Plasmodium falciparum) [TaxId: 5833]view
automated matchesDuffy binding domainPlasmodium vivax [TaxId: 126793]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320
- N E V L S N C R - - - - - - - - - - - - - - - - - - - - - - - - - E K R K G M - - - - - - K W D C K K K N D R S - N Y V C I P D R R I Q L C I V N L A I I K T Y T K E T M K D H F I E A S K K E S Q L L L K K N D N K Y N S K F C N D L K N S F L D Y G H L A M G N D M D F G G Y S T K A E N K I Q E V F K G A H G E I S E H K I K N F R K K W W N E F R E K L W E A M L S E H K N N I C - - K N I P Q E E L Q I T Q W I K E W H G E F L L E R D N R A K L P K S K C K N N A L - - - Y E A C - E K E C I D P C M K Y R D W I I R S K F E W H T L S K E Y E T Q K V - - - - - - - - - - P K E N A E N Y L I K I S E N K N D A K V S L L L N - N C D A E Y S K Y C D - - - - -
C K H T T T L V K S V L N G N D N T I K E K R E H I D L D D F S K F G C D K N S V D T N T K V W E C K K P Y K L S T K D V C V P P R R Q E L C L G N I D R I Y D K N L L M I K E H I L A I A I Y E S R I L K R K Y K N K D D K E V C K I I N K T F A D I R D I I G G T D Y W N D L S N R K L V G K I N T N S N Y V H R - - N K Q N D K L F R D E W W K V I K K D V W N V I S W V F K D K T V C K E D D I E N I P Q F F R W F S E W G D D Y C Q D K T K M I E T L K V - - - - - - - - - - - E C C E D D N C K R K C N S Y K E W I S K K K E E Y N K Q A K Q Y Q E Y Q K G N N Y K M Y S E F K S I K P E V Y L K K Y S E K C S N L N F E D E F K E E L H S D Y K N K C T M C P E V
- N T V M K N C N - - - - - - - - - - - - - - - - - - - - - - - - - Y K R K R R E - - - - R D W D C N - T K K - - - - D V C I P D R R Y Q L C M K E L T N L T - F R K L Y L K R K L I Y D A A V E G D L L L K L N N Y R Y N K D F C K D I R W S L G D F G D I I M G T D M E G I G Y S K V V E N N L R S I F - - - - G T D - - E K A Q Q R R K Q W W N E S K A Q I W T A M M Y S V - - C K L - - N V A V N I E P Q I Y R W I R E W G R D Y V S E L P T E V Q K L K E K C D G K I N Y T D K K V C K V P P C Q N A C K S Y D Q W I T R K K N Q W D V L S N K F I S V K N A E K V Q - - - T A G I V T P Y D I L K Q E L D E F N E V A F E N E I N - K R D G A Y I E L C V C S - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1zroa1 A Q25735 GO:0016020
d1zroa1 A Q25735 GO:0044650
d1zroa1 A Q25735 GO:0046789
d1zroa1 A Q25735 GO:0016020
d1zroa1 A Q25735 GO:0044650
d1zroa1 A Q25735 GO:0046789
d1zroa2 A Q25735 GO:0016020
d1zroa2 A Q25735 GO:0044650
d1zroa2 A Q25735 GO:0046789
d1zroa2 A Q25735 GO:0016020
d1zroa2 A Q25735 GO:0044650
d1zroa2 A Q25735 GO:0046789
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in