Superfamily : 103491 [ Preprotein translocase SecY subunit ]
Class : Membrane and cell surface proteins and peptides
Fold : Preprotein translocase SecY subunit
# of Members : 3
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1rh5a-  (   2 )    kklipilekipevelpvkeitfkeklkwtgiVlvlYfimGcidVytaga-
d5awwy-  (   1 )     mvkAfwsal-------qipelrqrvlfTllvlaaYrlgAfipTpGVdld
d6z3ta-  (  28 )                         fkekvlwtaiTlfifl-vCcqiplf----
                                           aaaaaaaaaaaaaa             

                             60        70        80        90        100 
d1rh5a-  (  51 )    qip--------aifefWqtiTASrI--gtlITLGIgPivtAgIimQllVG
d5awwy-  (  43 )    kIqeFlrtaqGgVFgIInLFSGgNFerFSiFAlGImPyItAaIimqilvt
d6z3ta-  (  52 )    ---gimssdsadpfywmrviLAsn--rgtLMElGispivtSGlimqllag
                                                       aaaaaaaaaaaaaaa

                             110       120       130       140       150 
d1rh5a-  (  91 )    sgiiqmdls--ipenralfqgcqkllSiimCfvEAvlFvgAGAfg---il
d5awwy-  (  93 )    vvpaleklskegeeGrriinqytrigGialGafqGffLAtaFLGaegGrF
d6z3ta-  (  97 )    ar--------------alfngaqklfGMiiTigqSivyvm----------
                                    aaaaaaaaaaaaaaaaaaaaaaa           

                             160       170       180       190       200 
d1rh5a-  ( 136 )    t-------pllaflViiqIAfgSiiLIyldeiVskyGIgsGigLFIaaGV
d5awwy-  ( 143 )    LlpgwspgpfFwfvVvvtQvagIalLLwMAerIteyGignGtslIIfaGI
d6z3ta-  ( 134 )    ---------------tllitiqLfvAGliVllldel---lgislFIAtNI
                                      aaaaaaaaaaaaaaaaa      aaaaaaaaa

                             210       220       230       240       250 
d1rh5a-  ( 179 )    sqtifvgalgp-----------eGylwkflnsli------------qgvp
d5awwy-  ( 193 )    vvewlpqil--------------rtiglirt---------------gevn
d6z3ta-  ( 188 )    cetivwkafspttvntgrgmefegAiiAlfhllatrtdkvralreafyrq
                    a  aaa                   aaaaaa                   

                             260       270       280       290       300 
d1rh5a-  ( 206 )    nieyiaPiigtiiVflmVvyaecmrveiplah------------grikga
d5awwy-  ( 214 )    lvaflfflafivlafagMaavqqaerrIpVqyarkvvggrvyGg-----q
d6z3ta-  ( 238 )    nlpnlmnliaTifVfavViyfQgfrvdlpIksar------------yrgq
                             aaaaaaaaaaaa   bbbb                      

                             310       320       330       340       350 
d1rh5a-  ( 244 )    vgkypikfvyVsniPVilAaAlFAniqLwGlalyrmgipilGhYeggrAv
d5awwy-  ( 259 )    atyipIklnAagViPIIfAAAiLqipIflAAPfQd--npvlqg-------
d6z3ta-  ( 276 )    yntypIklFytsNipIIlqSAlvsnlyvisqmlsarfspvg---------
                       bbbb      aaaaaaaaaaaaaaaaa                    

                             360       370       380       390       400 
d1rh5a-  ( 294 )    dgiAyylstpyglssvisdpihaivYmiaMiitCvmFGifwVeTtgldpk
d5awwy-  ( 300 )    --iAnffnPtr------------psGlfiEvllVilfTyvyTavq-fdpk
d6z3ta-  ( 340 )    -glchylsppesfgsvledpvhavvYivfmlgsCaffSktwIevsgssak
                                           aaaaaaaaaaaaaaaaaaa      aa

                             410       420       430       440       450 
d1rh5a-  ( 344 )    smAkris-----------ekaiehrlkryipplTvmSSafVGfLATiANf
d5awwy-  ( 335 )    riaesLreygGfIpgirpgeptvkfLehiVsrlTlwGAlflGlvTllPQi
d6z3ta-  ( 389 )    dvakqlkeqqmvmrghre-tsMvheLnryIptaAafGGlcIGalSvlADf
                    aaaaa                  aaaa    aaaaaaaaaaaaaaa    

                             460       470       480       
d1rh5a-  ( 395 )    i-------GAlGgGtGVLLtvsivyrmyeqllrert   
d5awwy-  ( 385 )    iQnltgihsiAFSGIGLLIvvgValdtlrqvesqlmlrs
d6z3ta-  ( 438 )    -------lgAIgsGtGILLAvTIiyqyfeifvke     
                                   aaaaaaaaaaaaaaaaa       

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Preprotein translocase SecY subunitPreprotein translocase SecY subunitMethanococcus jannaschii [TaxId: 2190]view
automated matchesautomated matchesThermus thermophilus [TaxId: 300852]view
automated matchesautomated matchesCanis lupus [TaxId: 9615]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480
K K L I P I L E K I P E V E L P V K E I T F K E K L K W T G I V L V L Y F I M G C I D V Y T A G A - Q I P - - - - - - - - A I F E F W Q T I T A S R I - - G T L I T L G I G P I V T A G I I M Q L L V G S G I I Q M D L S - - I P E N R A L F Q G C Q K L L S I I M C F V E A V L F V G A G A F G - - - I L T - - - - - - - P L L A F L V I I Q I A F G S I I L I Y L D E I V S K Y G I G S G I G L F I A A G V S Q T I F V G A L G P - - - - - - - - - - - E G Y L W K F L N S L I - - - - - - - - - - - - Q G V P N I E Y I A P I I G T I I V F L M V V Y A E C M R V E I P L A H - - - - - - - - - - - - G R I K G A V G K Y P I K F V Y V S N I P V I L A A A L F A N I Q L W G L A L Y R M G I P I L G H Y E G G R A V D G I A Y Y L S T P Y G L S S V I S D P I H A I V Y M I A M I I T C V M F G I F W V E T T G L D P K S M A K R I S - - - - - - - - - - - E K A I E H R L K R Y I P P L T V M S S A F V G F L A T I A N F I - - - - - - - G A L G G G T G V L L T V S I V Y R M Y E Q L L R E R T - - -
- M V K A F W S A L - - - - - - - Q I P E L R Q R V L F T L L V L A A Y R L G A F I P T P G V D L D K I Q E F L R T A Q G G V F G I I N L F S G G N F E R F S I F A L G I M P Y I T A A I I M Q I L V T V V P A L E K L S K E G E E G R R I I N Q Y T R I G G I A L G A F Q G F F L A T A F L G A E G G R F L L P G W S P G P F F W F V V V V T Q V A G I A L L L W M A E R I T E Y G I G N G T S L I I F A G I V V E W L P Q I L - - - - - - - - - - - - - - R T I G L I R T - - - - - - - - - - - - - - - G E V N L V A F L F F L A F I V L A F A G M A A V Q Q A E R R I P V Q Y A R K V V G G R V Y G G - - - - - Q A T Y I P I K L N A A G V I P I I F A A A I L Q I P I F L A A P F Q D - - N P V L Q G - - - - - - - - - I A N F F N P T R - - - - - - - - - - - - P S G L F I E V L L V I L F T Y V Y T A V Q - F D P K R I A E S L R E Y G G F I P G I R P G E P T V K F L E H I V S R L T L W G A L F L G L V T L L P Q I I Q N L T G I H S I A F S G I G L L I V V G V A L D T L R Q V E S Q L M L R S
- - - - - - - - - - - - - - - - - - - - - F K E K V L W T A I T L F I F L - V C C Q I P L F - - - - - - - G I M S S D S A D P F Y W M R V I L A S N - - R G T L M E L G I S P I V T S G L I M Q L L A G A R - - - - - - - - - - - - - - A L F N G A Q K L F G M I I T I G Q S I V Y V M - - - - - - - - - - - - - - - - - - - - - - - - - T L L I T I Q L F V A G L I V L L L D E L - - - L G I S L F I A T N I C E T I V W K A F S P T T V N T G R G M E F E G A I I A L F H L L A T R T D K V R A L R E A F Y R Q N L P N L M N L I A T I F V F A V V I Y F Q G F R V D L P I K S A R - - - - - - - - - - - - Y R G Q Y N T Y P I K L F Y T S N I P I I L Q S A L V S N L Y V I S Q M L S A R F S P V G - - - - - - - - - - G L C H Y L S P P E S F G S V L E D P V H A V V Y I V F M L G S C A F F S K T W I E V S G S S A K D V A K Q L K E Q Q M V M R G H R E - T S M V H E L N R Y I P T A A A F G G L C I G A L S V L A D F - - - - - - - L G A I G S G T G I L L A V T I I Y Q Y F E I F V K E - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1rh5a_ A Q60175 GO:0005048
d1rh5a_ A Q60175 GO:0005886
d1rh5a_ A Q60175 GO:0006605
d1rh5a_ A Q60175 GO:0006616
d1rh5a_ A Q60175 GO:0008320
d1rh5a_ A Q60175 GO:0015031
d1rh5a_ A Q60175 GO:0016020
d1rh5a_ A Q60175 GO:0065002
d1rh5a_ A Q57817 GO:0005048
d1rh5a_ A Q57817 GO:0005886
d1rh5a_ A Q57817 GO:0006605
d1rh5a_ A Q57817 GO:0006616
d1rh5a_ A Q57817 GO:0008320
d1rh5a_ A Q57817 GO:0015031
d1rh5a_ A Q57817 GO:0016020
d1rh5a_ A Q57817 GO:0065002
d1rh5a_ A P60460 GO:0005048
d1rh5a_ A P60460 GO:0005886
d1rh5a_ A P60460 GO:0006605
d1rh5a_ A P60460 GO:0006616
d1rh5a_ A P60460 GO:0008320
d1rh5a_ A P60460 GO:0015031
d1rh5a_ A P60460 GO:0016020
d1rh5a_ A P60460 GO:0065002
d1rh5a_ A Q60175 GO:0005048
d1rh5a_ A Q60175 GO:0005886
d1rh5a_ A Q60175 GO:0006605
d1rh5a_ A Q60175 GO:0006616
d1rh5a_ A Q60175 GO:0008320
d1rh5a_ A Q60175 GO:0015031
d1rh5a_ A Q60175 GO:0016020
d1rh5a_ A Q60175 GO:0065002
d1rh5a_ A Q57817 GO:0005048
d1rh5a_ A Q57817 GO:0005886
d1rh5a_ A Q57817 GO:0006605
d1rh5a_ A Q57817 GO:0006616
d1rh5a_ A Q57817 GO:0008320
d1rh5a_ A Q57817 GO:0015031
d1rh5a_ A Q57817 GO:0016020
d1rh5a_ A Q57817 GO:0065002
d1rh5a_ A P60460 GO:0005048
d1rh5a_ A P60460 GO:0005886
d1rh5a_ A P60460 GO:0006605
d1rh5a_ A P60460 GO:0006616
d1rh5a_ A P60460 GO:0008320
d1rh5a_ A P60460 GO:0015031
d1rh5a_ A P60460 GO:0016020
d1rh5a_ A P60460 GO:0065002
d1rh5a_ A Q60175 GO:0005048
d1rh5a_ A Q60175 GO:0005886
d1rh5a_ A Q60175 GO:0006605
d1rh5a_ A Q60175 GO:0006616
d1rh5a_ A Q60175 GO:0008320
d1rh5a_ A Q60175 GO:0015031
d1rh5a_ A Q60175 GO:0016020
d1rh5a_ A Q60175 GO:0065002
d1rh5a_ A Q57817 GO:0005048
d1rh5a_ A Q57817 GO:0005886
d1rh5a_ A Q57817 GO:0006605
d1rh5a_ A Q57817 GO:0006616
d1rh5a_ A Q57817 GO:0008320
d1rh5a_ A Q57817 GO:0015031
d1rh5a_ A Q57817 GO:0016020
d1rh5a_ A Q57817 GO:0065002
d1rh5a_ A P60460 GO:0005048
d1rh5a_ A P60460 GO:0005886
d1rh5a_ A P60460 GO:0006605
d1rh5a_ A P60460 GO:0006616
d1rh5a_ A P60460 GO:0008320
d1rh5a_ A P60460 GO:0015031
d1rh5a_ A P60460 GO:0016020
d1rh5a_ A P60460 GO:0065002