3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14467

Details:

PFam ID : PF14467

PFam Domain Description : Domain of unknown function (DUF4426)

Number of Sequence in 50% Dataset : 22

Number of Sequence in Full Dataset : 83

Average sequence length: 118.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14467	A7C1J9_9GAMM_32_157	4.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14467	A7C1J9_9GAMM_32_157	100

Sequence based PCA Plot of the family - PF14467 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=37 Length=8
Motif2 Start=117 Length=8
Motif3 Start=11 Length=8
Motif4 Start=82 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay