3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14432

Details:

PFam ID : PF14432

PFam Domain Description : DYW family of nucleic acid deaminases

Number of Sequence in 50% Dataset : 35

Number of Sequence in Full Dataset : 859

Average sequence length: 121.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14432	C5CZG8_VARPS_1501_1600	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14432	D8I8M2_AMYMU_225_329	100

Sequence based PCA Plot of the family - PF14432 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=40 Length=8
Motif2 Start=101 Length=11
Motif3 Start=29 Length=8
Motif4 Start=123 Length=14

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay