3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14420

Details:

PFam ID : PF14420

PFam Domain Description : Clr5 domain

Number of Sequence in 50% Dataset : 56

Number of Sequence in Full Dataset : 137

Average sequence length: 54.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14420	B6JXM0_SCHJY_6_42	96.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14420	A2R8D0_ASPNC_2_72	100

Sequence based PCA Plot of the family - PF14420 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=9 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay