3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14415

Details:

PFam ID : PF14415

PFam Domain Description : Domain of unknown function (DUF4424)

Number of Sequence in 50% Dataset : 41

Number of Sequence in Full Dataset : 64

Average sequence length: 222.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14415	D1RLE3_LEGLO_52_360	82.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14415	D5RDF3_FUSNN_60_278	100

Sequence based PCA Plot of the family - PF14415 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=18 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay