3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14396

Details:

PFam ID : PF14396

PFam Domain Description : Cystic fibrosis TM conductance regulator (CFTR), regulator domain

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 34

Average sequence length: 202.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14396	Q8H9W3_9CAUD_124_225	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14396	B7ZVN9_DANRE_638_848	100

Sequence based PCA Plot of the family - PF14396 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay