3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14392

Details:

PFam ID : PF14392

PFam Domain Description : Zinc knuckle

Number of Sequence in 50% Dataset : 90

Number of Sequence in Full Dataset : 247

Average sequence length: 36.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14392	B9SDZ3_RICCO_104_144	98.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14392	B9S9Q0_RICCO_22_72	99.1

Sequence based PCA Plot of the family - PF14392 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=6 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay