3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14391

Details:

PFam ID : PF14391

PFam Domain Description : Domain of unknown function (DUF4421)

Number of Sequence in 50% Dataset : 26

Number of Sequence in Full Dataset : 53

Average sequence length: 286.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14391	E7RST2_9BACT_46_354	72

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14391	A3I0X4_9BACT_35_344	100

Sequence based PCA Plot of the family - PF14391 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=212 Length=8
Motif2 Start=59 Length=8
Motif3 Start=267 Length=8
Motif4 Start=151 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay