3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14385

Details:

PFam ID : PF14385

PFam Domain Description : Domain of unknown function (DUF4416)

Number of Sequence in 50% Dataset : 25

Number of Sequence in Full Dataset : 59

Average sequence length: 160.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14385	B0SRM1_LEPBP_8_170	95.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14385	C9RMH8_FIBSS_6_172	100

Sequence based PCA Plot of the family - PF14385 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=46 Length=8
Motif2 Start=116 Length=17
Motif3 Start=141 Length=8
Motif4 Start=94 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay