3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14369

Details:

PFam ID : PF14369

PFam Domain Description : zinc-finger

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 154

Average sequence length: 33.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14369	E9BYM2_9EUKA_4_41	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14369	E9BYM2_9EUKA_4_41	100

Sequence based PCA Plot of the family - PF14369 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=17
Motif2 Start=26 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay