3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14367

Details:

PFam ID : PF14367

PFam Domain Description : Domain of unknown function (DUF4411)

Number of Sequence in 50% Dataset : 67

Number of Sequence in Full Dataset : 110

Average sequence length: 148.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14367	E6JJF4_RIEAN_3_185	89.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14367	Q74JR2_LACJO_4_183	100

Sequence based PCA Plot of the family - PF14367 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=31 Length=8
Motif2 Start=152 Length=8
Motif3 Start=3 Length=8
Motif4 Start=22 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay