3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14363

Details:

PFam ID : PF14363

PFam Domain Description : Domain associated at C-terminal with AAA

Number of Sequence in 50% Dataset : 48

Number of Sequence in Full Dataset : 196

Average sequence length: 94.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14363	B9S6B5_RICCO_91_145	87.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14363	A2YGL6_ORYSI_29_127	100

Sequence based PCA Plot of the family - PF14363 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay