3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14352

Details:

PFam ID : PF14352

PFam Domain Description : Domain of unknown function (DUF4402)

Number of Sequence in 50% Dataset : 79

Number of Sequence in Full Dataset : 92

Average sequence length: 129.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14352	E3BJB1_9VIBR_27_142	82.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14352	B1KGX4_SHEWM_22_138	98.9

Sequence based PCA Plot of the family - PF14352 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay