3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14325

Details:

PFam ID : PF14325

PFam Domain Description : Domain of unknown function (DUF4383)

Number of Sequence in 50% Dataset : 32

Number of Sequence in Full Dataset : 112

Average sequence length: 124.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14325	Q6MR35_BDEBA_43_169	29.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14325	B4WIP3_9SYNE_3_136	100

Sequence based PCA Plot of the family - PF14325 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=24 Length=8
Motif2 Start=1 Length=8
Motif3 Start=15 Length=8
Motif4 Start=113 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay