3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14314

Details:

PFam ID : PF14314

PFam Domain Description : Virus-capping methyltransferase

Number of Sequence in 50% Dataset : 21

Number of Sequence in Full Dataset : 35

Average sequence length: 630.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14314	D2E9X7_9RHAB_1355_2049	95

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14314	L_BEFVB_1375_2065	100

Sequence based PCA Plot of the family - PF14314 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=244 Length=8
Motif2 Start=380 Length=8
Motif3 Start=320 Length=11
Motif4 Start=406 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay