3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14297

Details:

PFam ID : PF14297

PFam Domain Description : Domain of unknown function (DUF4373)

Number of Sequence in 50% Dataset : 52

Number of Sequence in Full Dataset : 128

Average sequence length: 90.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14297	D0TAH0_9BACE_11_46	50.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14297	D6KLE8_9FIRM_8_124	100

Sequence based PCA Plot of the family - PF14297 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=8
Motif2 Start=22 Length=18
Motif3 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay