3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14290

Details:

PFam ID : PF14290

PFam Domain Description : Domain of unknown function (DUF4370)

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 21

Average sequence length: 205.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14290	C0PTS6_PICSI_1_92	75

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14290	D8RYK8_SELML_2_203	100

Sequence based PCA Plot of the family - PF14290 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay