3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14289

Details:

PFam ID : PF14289

PFam Domain Description : Domain of unknown function (DUF4369)

Number of Sequence in 50% Dataset : 244

Number of Sequence in Full Dataset : 426

Average sequence length: 108.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14289	Q015K3_OSTTA_2563_2682	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14289	D7VKY4_9SPHI_12_140	98.8

Sequence based PCA Plot of the family - PF14289 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=28 Length=8
Motif2 Start=19 Length=8
Motif3 Start=10 Length=8
Motif4 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay