3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14286

Details:

PFam ID : PF14286

PFam Domain Description : DHHW protein

Number of Sequence in 50% Dataset : 116

Number of Sequence in Full Dataset : 188

Average sequence length: 200.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14286	C1I6T0_9CLOT_75_249	77.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14286	E9SNJ7_CLOSY_34_147	100

Sequence based PCA Plot of the family - PF14286 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=321 Length=8
Motif2 Start=381 Length=8
Motif3 Start=405 Length=8
Motif4 Start=282 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay