3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14285

Details:

PFam ID : PF14285

PFam Domain Description : Domain of unknown function (DUF4367)

Number of Sequence in 50% Dataset : 139

Number of Sequence in Full Dataset : 204

Average sequence length: 170.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14285	B2TNP8_CLOBB_59_308	75.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14285	C0GEH7_9FIRM_49_236	97.0

Sequence based PCA Plot of the family - PF14285 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8
Motif3 Start=63 Length=8
Motif4 Start=158 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay