3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14274

Details:

PFam ID : PF14274

PFam Domain Description : Domain of unknown function (DUF4361)

Number of Sequence in 50% Dataset : 13

Number of Sequence in Full Dataset : 32

Average sequence length: 154.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14274	D7IKG6_9BACE_159_330	91.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14274	A7LZP6_BACOV_167_332	100

Sequence based PCA Plot of the family - PF14274 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=29 Length=8
Motif2 Start=20 Length=8
Motif3 Start=51 Length=8
Motif4 Start=11 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay