3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14251

Details:

PFam ID : PF14251

PFam Domain Description : Domain of unknown function (DUF4346)

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 109

Average sequence length: 90.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14251	A1RYR8_THEPD_419_458	60

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14251	B5IKT5_9CHRO_1_88	100

Sequence based PCA Plot of the family - PF14251 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=16 Length=17

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay