3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14226

Details:

PFam ID : PF14226

PFam Domain Description : non-haem dioxygenase in morphine synthesis N-terminal

Number of Sequence in 50% Dataset : 387

Number of Sequence in Full Dataset : 2563

Average sequence length: 113.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14226	D7T4N3_VITVI_64_142	88.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14226	D3BGA8_POLPA_30_189	99.9

Sequence based PCA Plot of the family - PF14226 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=56 Length=11
Motif2 Start=1 Length=8
Motif3 Start=152 Length=8
Motif4 Start=32 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay