3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14221

Details:

PFam ID : PF14221

PFam Domain Description : Domain of unknown function (DUF4330)

Number of Sequence in 50% Dataset : 26

Number of Sequence in Full Dataset : 68

Average sequence length: 157.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14221	Q2JVM1_SYNJA_1_169	56

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14221	A6P0X1_9BACE_1_173	100

Sequence based PCA Plot of the family - PF14221 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=28 Length=8
Motif2 Start=19 Length=8
Motif3 Start=10 Length=8
Motif4 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay