3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14211

Details:

PFam ID : PF14211

PFam Domain Description : Domain of unknown function (DUF4323)

Number of Sequence in 50% Dataset : 19

Number of Sequence in Full Dataset : 64

Average sequence length: 75.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14211	C0QQH8_PERMH_7_125	11.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14211	C3WRB8_9FUSO_1_93	100

Sequence based PCA Plot of the family - PF14211 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=14 Length=8
Motif2 Start=2 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay