3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14191

Details:

PFam ID : PF14191

PFam Domain Description : YodL-like

Number of Sequence in 50% Dataset : 21

Number of Sequence in Full Dataset : 99

Average sequence length: 100.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14191	F0R8G9_BACSH_26_136	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14191	D6DFG6_CLOSC_1_111	100

Sequence based PCA Plot of the family - PF14191 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=18
Motif2 Start=1 Length=8
Motif3 Start=49 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay