3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14188

Details:

PFam ID : PF14188

PFam Domain Description : Domain of unknown function (DUF4311)

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 22

Average sequence length: 184.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14188	B2VCZ8_ERWT9_1_86	60

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14188	Q5WI58_BACSK_24_236	100

Sequence based PCA Plot of the family - PF14188 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay