3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14179

Details:

PFam ID : PF14179

PFam Domain Description : YppG-like protein

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 48

Average sequence length: 127.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14179	E5W122_9BACI_19_117	92.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14179	C1PF37_BACCO_18_163	100

Sequence based PCA Plot of the family - PF14179 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay