3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14173

Details:

PFam ID : PF14173

PFam Domain Description : ComG operon protein 7

Number of Sequence in 50% Dataset : 20

Number of Sequence in Full Dataset : 34

Average sequence length: 91.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14173	A8MGG8_ALKOO_76_218	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14173	E1UL03_BACAS_29_124	100

Sequence based PCA Plot of the family - PF14173 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay